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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
222
accessible chromatin
169
candidate regulatory elements
157
target gene predictions
92
differential activity
80
chromatin state
54
binding sites
41
variant allelic effects
36
histone modifications
9
eQTL
2
caQTL
Date released
243
February, 2021
232
September, 2022
155
September, 2023
133
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
10
October, 2022
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
January, 2022
6
March, 2024
5
October, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
November, 2019
Available data
680
bed bed3+
328
tsv
179
bigWig
78
txt
77
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1119
Homo sapiens
Biosample type
872
primary cell
110
tissue
107
cell line
30
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
802
AMP
155
KPMP
133
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
760
hg19
283
GRCh38
BIOSAMPLE
TYPE
1119 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 152 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus muscularis mucosa
1
5
2
2
1
esophagus squamous epithelium
1
6
2
2
esophagus
4
3
2
1
+ See 27 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
RPMI7951
1
2
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 24 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 6 more…
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