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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
222
accessible chromatin
182
candidate regulatory elements
165
target gene predictions
92
differential activity
91
chromatin state
47
binding sites
41
variant allelic effects
33
histone modifications
5
eQTL
2
caQTL
Date released
265
September, 2022
238
February, 2021
155
September, 2023
129
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
3
March, 2024
2
January, 2022
2
May, 2022
2
November, 2019
1
July, 2020
Available data
691
bed bed3+
325
tsv
179
bigWig
88
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1134
Homo sapiens
Biosample type
864
primary cell
193
tissue
46
cell line
31
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
821
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
782
hg19
287
GRCh38
organ_slims!
blood
bodily fluid
BIOSAMPLE
TYPE
1134 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 153 more…
tissue
placenta
1
26
15
14
1
2
1
spleen
1
2
15
8
6
1
1
pigmented layer of retina
20
chorionic villus
8
4
4
breast epithelium
1
5
3
2
+ See 22 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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