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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
245
accessible chromatin
238
candidate regulatory elements
181
target gene predictions
114
chromatin state
81
differential activity
47
variant allelic effects
35
binding sites
30
histone modifications
6
eQTL
2
caQTL
Date released
334
September, 2022
285
February, 2021
135
September, 2023
125
November, 2021
62
February, 2024
35
August, 2021
34
March, 2023
33
June, 2020
33
May, 2021
26
February, 2023
23
May, 2020
22
November, 2022
20
January, 2021
16
January, 2020
11
February, 2020
8
March, 2020
7
May, 2024
6
August, 2018
6
October, 2022
5
October, 2019
4
April, 2020
4
March, 2024
2
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
776
bed bed3+
326
tsv
196
bigWig
112
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1243
Homo sapiens
Biosample type
729
primary cell
404
tissue
85
cell line
25
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
957
AMP
135
KPMP
125
ENCODE
20
T1D
4
LungMap
2
community
Genome assembly (visualization)
891
hg19
301
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
1243 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 136 more…
tissue
kidney
7
10
29
14
16
1
1
2
1
right kidney
1
20
10
10
1
renal cortex interstitium
1
20
9
9
1
renal pelvis
2
19
9
9
1
retina
1
23
6
3
3
1
1
1
1
+ See 31 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
1
3
1
1
2
1
WERI-Rb-1
1
2
1
1
2
1
ACHN
1
2
1
1
Caki2
1
2
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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