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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
250
accessible chromatin
182
candidate regulatory elements
159
target gene predictions
92
differential activity
88
chromatin state
59
binding sites
42
variant allelic effects
34
histone modifications
5
eQTL
2
caQTL
Date released
253
February, 2021
253
September, 2022
155
September, 2023
130
November, 2021
76
February, 2024
38
June, 2020
38
March, 2023
36
May, 2021
26
February, 2023
23
August, 2021
22
November, 2022
20
January, 2021
16
May, 2020
15
January, 2020
11
February, 2020
10
May, 2024
9
October, 2022
7
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
728
bed bed3+
326
tsv
195
bigWig
84
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1167
Homo sapiens
Biosample type
836
primary cell
190
tissue
115
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
853
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
815
hg19
284
GRCh38
BIOSAMPLE
TYPE
1167 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 149 more…
tissue
small intestine
1
29
17
15
1
retina
1
23
6
3
3
1
1
1
1
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 20 more…
cell line
EndoC_BH1
8
8
1
3
1
GM12864
1
2
1
1
2
1
GM12865
1
2
1
1
2
1
MM.1S
1
2
2
1
1
1
WERI-Rb-1
1
2
1
1
2
1
+ See 24 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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