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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
232
candidate regulatory elements
225
accessible chromatin
196
target gene predictions
117
chromatin state
90
differential activity
50
binding sites
41
variant allelic effects
34
histone modifications
9
eQTL
2
caQTL
Date released
330
September, 2022
272
February, 2021
150
September, 2023
130
November, 2021
79
February, 2024
41
May, 2021
38
June, 2020
38
March, 2023
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
9
March, 2020
8
October, 2022
7
August, 2017
7
March, 2024
7
May, 2024
6
April, 2020
6
August, 2018
6
January, 2022
5
October, 2019
2
May, 2022
1
July, 2020
1
November, 2019
Available data
783
bed bed3+
324
tsv
176
bigWig
110
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1251
Homo sapiens
Biosample type
817
primary cell
331
tissue
79
cell line
24
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
943
AMP
150
KPMP
130
ENCODE
20
T1D
6
LungMap
2
community
Genome assembly (visualization)
896
hg19
312
GRCh38
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
1251 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
3
15
7
2
2
1
1
2
hepatocyte
13
2
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 146 more…
tissue
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
sigmoid colon
10
1
7
5
ovary
1
8
1
6
4
1
pigmented layer of retina
20
+ See 36 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
2
1
2
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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