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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
239
candidate regulatory elements
200
accessible chromatin
198
target gene predictions
122
chromatin state
85
gene expression
52
binding sites
38
differential activity
34
variant allelic effects
32
histone modifications
5
eQTL
2
caQTL
Date released
355
September, 2022
192
February, 2021
127
November, 2021
75
February, 2024
39
May, 2021
38
March, 2023
28
June, 2020
20
January, 2021
20
September, 2023
15
November, 2022
12
February, 2023
10
May, 2024
10
October, 2022
8
April, 2020
8
March, 2020
8
May, 2020
7
August, 2021
6
August, 2018
6
January, 2020
5
March, 2024
5
October, 2019
4
August, 2017
4
January, 2022
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
Available data
759
bed bed3+
161
bigWig
118
bed bed9
109
tsv
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
1007
Homo sapiens
Biosample type
563
primary cell
274
tissue
144
cell line
26
in vitro differentiated cells
Organ
959
epithelium
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
830
AMP
127
ENCODE
20
KPMP
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
879
hg19
308
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1007 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
3
15
7
9
2
2
1
1
2
hepatocyte
2
8
3
1
13
1
2
4
endothelial cell of umbilical vein
6
2
4
5
2
1
foreskin keratinocyte
11
4
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 91 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
1
11
11
ovary
8
1
6
4
1
1
pigmented layer of retina
20
+ See 15 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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