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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
292
candidate regulatory elements
276
gene expression
247
accessible chromatin
235
target gene predictions
162
chromatin state
92
differential activity
53
binding sites
51
variant allelic effects
40
histone modifications
12
eQTL
9
Fine-mapped variants
4
caQTL
Date released
420
September, 2022
312
February, 2021
155
September, 2023
136
November, 2021
84
February, 2024
44
May, 2021
40
June, 2020
38
March, 2023
31
August, 2021
26
January, 2020
26
May, 2020
23
March, 2020
20
January, 2021
19
February, 2020
15
February, 2023
15
November, 2022
10
May, 2024
7
April, 2020
7
August, 2017
7
October, 2019
7
October, 2022
6
April, 2019
6
August, 2018
6
January, 2022
5
March, 2024
4
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
930
bed bed3+
356
tsv
197
bigWig
150
bed bed9
78
txt
14
bigBed narrowPeak
12
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1473
Homo sapiens
Biosample type
857
primary cell
506
tissue
83
cell line
27
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1153
AMP
155
KPMP
136
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1093
hg19
395
GRCh38
organ_slims!
blood
BIOSAMPLE
TYPE
1473 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
3
9
15
7
2
2
1
1
2
hepatocyte
2
13
8
3
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 154 more…
tissue
heart
37
3
5
20
21
1
2
1
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
heart left ventricle
11
1
3
7
8
2
1
1
sigmoid colon
10
1
7
5
+ See 48 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
2
1
2
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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