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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
277
gene expression
250
candidate regulatory elements
242
accessible chromatin
210
target gene predictions
141
chromatin state
92
differential activity
51
binding sites
51
variant allelic effects
38
histone modifications
13
eQTL
12
Fine-mapped variants
4
caQTL
Date released
357
September, 2022
288
February, 2021
155
September, 2023
132
November, 2021
84
February, 2024
43
May, 2021
38
March, 2023
37
June, 2020
31
August, 2021
27
May, 2020
25
January, 2020
25
March, 2020
22
February, 2020
20
January, 2021
15
February, 2023
15
November, 2022
10
May, 2024
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2017
6
August, 2018
6
January, 2022
6
October, 2022
5
November, 2019
4
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
853
bed bed3+
361
tsv
195
bigWig
130
bed bed9
78
txt
14
bigBed narrowPeak
13
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1381
Homo sapiens
Biosample type
840
primary cell
434
tissue
80
cell line
27
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1065
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1000
hg19
375
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
1381 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
3
15
7
2
2
1
1
2
hepatocyte
13
2
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 150 more…
tissue
heart
3
37
5
20
21
1
2
1
large intestine
27
1
14
13
1
heart left ventricle
1
11
3
7
8
2
1
1
tibial nerve
2
6
3
3
4
2
2
3
sigmoid colon
10
1
7
5
+ See 42 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
2
1
2
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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