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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
337
candidate regulatory elements
255
target gene predictions
240
gene expression
215
accessible chromatin
173
chromatin state
81
differential activity
46
binding sites
38
variant allelic effects
35
histone modifications
8
eQTL
2
caQTL
Date released
501
September, 2022
318
February, 2021
135
September, 2023
128
November, 2021
65
February, 2024
43
May, 2021
39
June, 2020
34
March, 2023
23
August, 2021
20
January, 2021
15
November, 2022
12
February, 2023
11
May, 2020
10
January, 2020
10
May, 2024
10
October, 2022
8
February, 2020
8
March, 2020
7
August, 2017
7
March, 2024
6
April, 2020
6
August, 2018
5
January, 2022
5
October, 2019
2
May, 2022
1
July, 2020
1
November, 2019
Available data
933
bed bed3+
301
tsv
166
bed bed9
165
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1430
Homo sapiens
Biosample type
753
primary cell
483
tissue
168
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1139
AMP
135
KPMP
128
ENCODE
20
T1D
6
LungMap
2
community
Genome assembly (visualization)
1102
hg19
350
GRCh38
organ_slims!
blood vessel
BIOSAMPLE
TYPE
1430 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
3
7
9
15
2
2
1
1
2
hepatocyte
2
3
13
8
1
1
2
4
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
2
1
1
foreskin keratinocyte
11
4
4
+ See 134 more…
tissue
lung
33
17
1
16
1
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
left lung
26
13
13
right lung
22
11
1
11
+ See 39 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
1
2
1
HT-29
2
2
1
1
1
1
PC-9
2
2
1
1
1
1
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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