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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
candidate regulatory elements
257
gene expression
230
accessible chromatin
214
target gene predictions
133
chromatin state
92
differential activity
57
binding sites
41
histone modifications
41
variant allelic effects
7
eQTL
2
caQTL
Date released
378
September, 2022
301
February, 2021
155
September, 2023
132
November, 2021
79
February, 2024
42
May, 2021
40
June, 2020
38
March, 2023
23
August, 2021
20
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
9
March, 2020
7
April, 2020
7
August, 2017
7
October, 2022
6
August, 2018
6
March, 2024
5
October, 2019
4
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
853
bed bed3+
328
tsv
179
bigWig
126
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1339
Homo sapiens
Biosample type
834
primary cell
355
tissue
124
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
1023
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
982
hg19
331
GRCh38
organ_slims!
vagina
BIOSAMPLE
TYPE
1339 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
3
9
15
7
2
1
2
1
2
hepatocyte
2
13
8
3
1
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 148 more…
tissue
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
thymus
20
1
14
11
1
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
1
22Rv1
4
2
2
1
1
HT-29
2
1
2
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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