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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
230
accessible chromatin
222
candidate regulatory elements
168
target gene predictions
104
chromatin state
94
differential activity
48
variant allelic effects
37
binding sites
27
histone modifications
5
eQTL
2
caQTL
Date released
310
September, 2022
267
February, 2021
160
September, 2023
120
November, 2021
75
February, 2024
38
March, 2023
35
August, 2021
32
May, 2021
30
June, 2020
25
May, 2020
20
January, 2021
18
January, 2020
15
November, 2022
12
February, 2023
10
February, 2020
10
May, 2024
8
March, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
March, 2024
2
May, 2022
1
April, 2019
1
August, 2017
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
730
bed bed3+
357
tsv
190
bigWig
103
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1221
Homo sapiens
Biosample type
770
primary cell
355
tissue
74
cell line
22
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
912
AMP
160
KPMP
120
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
836
hg19
306
GRCh38
organ_slims!
skin of body
vein
BIOSAMPLE
TYPE
1221 results
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table-tab-icon
Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 145 more…
tissue
kidney
7
10
29
14
16
1
1
2
1
right kidney
1
20
10
10
1
renal cortex interstitium
1
20
9
9
1
renal pelvis
2
19
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
1
3
1
1
2
1
ACHN
1
2
1
1
Caki2
1
2
1
1
RCC 7860
1
2
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 3 more…
See all biosamples
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