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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
214
accessible chromatin
168
candidate regulatory elements
155
target gene predictions
92
differential activity
81
chromatin state
44
binding sites
39
variant allelic effects
31
histone modifications
5
eQTL
2
caQTL
Date released
234
September, 2022
230
February, 2021
155
September, 2023
125
November, 2021
78
February, 2024
38
March, 2023
38
May, 2021
30
June, 2020
23
August, 2021
20
January, 2021
15
November, 2022
13
May, 2020
12
February, 2023
12
January, 2020
10
May, 2024
9
February, 2020
6
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
August, 2017
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
655
bed bed3+
326
tsv
173
bigWig
78
txt
76
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1086
Homo sapiens
Biosample type
793
primary cell
195
tissue
72
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
778
AMP
155
KPMP
125
ENCODE
20
T1D
6
LungMap
2
community
Genome assembly (visualization)
734
hg19
271
GRCh38
organ_slims!
bronchus
vein
BIOSAMPLE
TYPE
1086 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 142 more…
tissue
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
breast epithelium
1
5
3
2
+ See 27 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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