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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
274
candidate regulatory elements
268
gene expression
251
accessible chromatin
212
target gene predictions
137
chromatin state
93
differential activity
51
variant allelic effects
49
binding sites
36
histone modifications
14
eQTL
12
Fine-mapped variants
4
caQTL
Date released
388
September, 2022
302
February, 2021
155
September, 2023
138
November, 2021
91
February, 2024
40
May, 2021
38
March, 2023
34
June, 2020
24
August, 2021
24
May, 2020
20
January, 2020
20
January, 2021
20
March, 2020
19
February, 2020
15
November, 2022
12
February, 2023
10
May, 2024
8
October, 2022
7
April, 2020
6
August, 2018
6
October, 2019
5
August, 2017
5
March, 2024
5
May, 2022
3
January, 2022
3
November, 2019
2
May, 2019
1
July, 2020
Available data
881
bed bed3+
350
tsv
201
bigWig
132
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1401
Homo sapiens
Biosample type
860
primary cell
448
tissue
65
cell line
28
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1079
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1039
hg19
370
GRCh38
organ_slims!
vein
BIOSAMPLE
TYPE
1401 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
3
9
15
7
2
2
1
1
2
hepatocyte
2
13
8
3
1
2
1
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 155 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
tibial nerve
6
2
3
3
4
2
2
3
pigmented layer of retina
20
+ See 53 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
2
1
1
1
1
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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