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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
232
accessible chromatin
200
candidate regulatory elements
177
target gene predictions
105
chromatin state
92
differential activity
47
variant allelic effects
45
binding sites
30
histone modifications
7
eQTL
6
Fine-mapped variants
2
caQTL
Date released
298
September, 2022
257
February, 2021
155
September, 2023
129
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
32
June, 2020
23
August, 2021
22
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
13
March, 2020
12
February, 2020
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
March, 2024
5
October, 2019
3
August, 2017
2
January, 2022
2
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
732
bed bed3+
337
tsv
189
bigWig
102
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1201
Homo sapiens
Biosample type
822
primary cell
303
tissue
50
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
888
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
845
hg19
310
GRCh38
organ_slims!
nerve
BIOSAMPLE
TYPE
1201 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 148 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
ovary
1
1
8
6
4
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
+ See 40 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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