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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
234
gene expression
205
candidate regulatory elements
198
accessible chromatin
185
target gene predictions
111
chromatin state
79
differential activity
37
variant allelic effects
36
binding sites
27
histone modifications
4
eQTL
2
caQTL
Date released
328
September, 2022
238
February, 2021
130
September, 2023
121
November, 2021
62
February, 2024
37
May, 2021
34
March, 2023
28
June, 2020
23
August, 2021
20
January, 2021
15
November, 2022
12
February, 2023
10
May, 2020
9
January, 2020
8
February, 2020
8
October, 2022
7
March, 2020
6
August, 2018
5
April, 2020
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
691
bed bed3+
293
tsv
159
bigWig
108
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1118
Homo sapiens
Biosample type
710
primary cell
252
tissue
132
cell line
24
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
840
AMP
130
KPMP
121
ENCODE
20
T1D
5
LungMap
2
community
Genome assembly (visualization)
802
hg19
268
GRCh38
organ_slims!
bone element
vasculature
BIOSAMPLE
TYPE
1118 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 127 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
1
11
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
3
1
1
+ See 22 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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