Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
262
gene expression
254
candidate regulatory elements
236
accessible chromatin
200
target gene predictions
127
chromatin state
93
differential activity
48
binding sites
48
variant allelic effects
34
histone modifications
9
eQTL
4
caQTL
3
Fine-mapped variants
Date released
355
September, 2022
285
February, 2021
155
September, 2023
133
November, 2021
91
February, 2024
40
May, 2021
38
March, 2023
31
June, 2020
24
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
15
November, 2022
12
February, 2020
12
February, 2023
12
March, 2020
9
October, 2022
8
May, 2024
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
May, 2022
4
March, 2024
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
828
bed bed3+
333
tsv
189
bigWig
121
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1318
Homo sapiens
Biosample type
868
primary cell
362
tissue
60
cell line
28
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1001
AMP
155
KPMP
133
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
963
hg19
329
GRCh38
organ_slims!
heart
spleen
BIOSAMPLE
TYPE
1318 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
Fine-mapped variants
primary cell
endothelial cell
9
3
15
7
2
2
1
1
2
hepatocyte
13
2
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 151 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
See all biosamples
Download