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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
3
MeRIP-seq
Assay category
35
DNA binding
Target of assay
107
histone
107
histone modification
55
broad histone mark
52
narrow histone mark
38
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
13
October, 2019
12
August, 2017
3
December, 2017
3
November, 2020
2
November, 2017
2
November, 2019
1
August, 2021
1
June, 2019
1
May, 2021
Available data
35
bam
17
fastq
2
bigWig
2
tagAlign
Organism
38
Homo sapiens
Biosample type
18
primary cell
11
tissue
5
cell line
4
in vitro differentiated cells
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
38
AMP
Genome assembly (visualization)
2
hg19
Lab
35
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
7
inconsistent ontology term
organ_slims!
kidney
lung
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 2 more…
tissue
tibial nerve
11
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
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