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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
271
gene expression
228
accessible chromatin
142
target gene predictions
134
candidate regulatory elements
98
differential activity
70
chromatin state
46
binding sites
45
variant allelic effects
31
histone modifications
18
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
219
February, 2021
191
September, 2022
155
September, 2023
128
November, 2021
80
February, 2024
51
March, 2023
42
May, 2021
31
August, 2021
28
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
November, 2022
14
March, 2020
12
February, 2020
12
February, 2023
10
May, 2024
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
6
October, 2022
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
633
bed bed3+
350
tsv
188
bigWig
78
txt
63
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1094
Homo sapiens
Biosample type
846
primary cell
168
tissue
54
cell line
26
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
780
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
711
hg19
275
GRCh38
organ_slims!
testis
BIOSAMPLE
TYPE
1094 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 153 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 20 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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