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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
210
accessible chromatin
175
target gene predictions
105
candidate regulatory elements
92
differential activity
55
chromatin state
45
binding sites
40
variant allelic effects
29
histone modifications
4
eQTL
2
caQTL
Date released
201
February, 2021
157
September, 2022
155
September, 2023
126
February, 2024
123
November, 2021
38
March, 2023
36
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
October, 2022
6
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
605
bed bed3+
326
tsv
173
bigWig
78
txt
52
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1012
Homo sapiens
Biosample type
804
primary cell
108
cell line
74
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
706
AMP
155
KPMP
123
ENCODE
20
T1D
6
LungMap
2
community
Genome assembly (visualization)
660
hg19
284
GRCh38
organ_slims!
bronchus
small intestine
BIOSAMPLE
TYPE
1012 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 143 more…
cell line
HeLa-S3
55
5
3
1
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
uterus
1
1
2
3
1
1
endometrium cancer
1
1
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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