Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 253gene expression
  • 212accessible chromatin
  • 109candidate regulatory elements
  • 92differential activity
  • 63target gene predictions
  • 53chromatin state
  • 43binding sites
  • 41variant allelic effects
  • 28histone modifications
  • 3eQTL
  • 2caQTL
Date released
  • 196February, 2021
  • 155September, 2023
  • 151September, 2022
  • 78November, 2021
  • 76February, 2024
  • 38March, 2023
  • 25June, 2020
  • 24May, 2021
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 9May, 2024
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 498bed bed3+
  • 324tsv
  • 176bigWig
  • 78txt
  • 50bed bed9
  • 14bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
Organism
  • 899Homo sapiens
Collection Tags
  • 191DGA
  • 155KPMP
  • 144EpiMap
  • 110AMP
  • 99T2DKP
  • 81ChIP-Atlas
  • 63ENCODE
  • 44HPAP
  • 43 T2DKP
  • 35T1D
  • 30CMDGA
  • 6FNIH_projects-heart
  • 4T2D
  • 3FNIH_projects-liver
  • 2GTEx
Biosample type
  • 770primary cell
  • 60tissue
  • 43cell line
  • 26in vitro differentiated cells
Organ
  • 2909vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 899epithelium
  • 652kidney
  • 456brain
  • 449connective tissue
  • 371musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 159liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 637AMP
  • 155KPMP
  • 78ENCODE
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 550hg19
  • 194GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

899 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell9153122112
hepatocyte138211124
epithelial cell of proximal tubule16121111
glomerular endothelial cell1422111
endothelial cell of umbilical vein263521
tissue
pigmented layer of retina20
esophagus squamous epithelium1622
breast epithelium1522
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188311
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte211
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego