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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 253gene expression
  • 213accessible chromatin
  • 122target gene predictions
  • 92differential activity
  • 53chromatin state
  • 48candidate regulatory elements
  • 43binding sites
  • 41variant allelic effects
  • 28histone modifications
  • 4eQTL
  • 3caQTL
Date released
  • 155September, 2023
  • 151September, 2022
  • 144February, 2021
  • 127November, 2021
  • 76February, 2024
  • 38March, 2023
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 3July, 2025
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 496bed bed3+
  • 326tsv
  • 176bigWig
  • 78txt
  • 50bed bed9
  • 14bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
  • 1bed bed3
  • 1bed narrowPeak
Organism
  • 900Homo sapiens
Collection Tags
  • 201DGA
  • 159AMP
  • 155KPMP
  • 148T2DKP
  • 144EpiMap
  • 81ChIP-Atlas
  • 48 T2DKP
  • 44HPAP
  • 35T1D
  • 30CMDGA
  • 11ENCODE
  • 4T2D
  • 2GTEx
Biosample type
  • 778primary cell
  • 54tissue
  • 43cell line
  • 25in vitro differentiated cells
Organ
  • 3345blood
  • 2876vasculature
  • 2841blood vessel
  • 2831bodily fluid
  • 2655vein
  • 900epithelium
  • 852brain
  • 672kidney
  • 478connective tissue
  • 454heart
  • 379lung
  • 308musculature of body
  • 308pancreas
  • 300intestine
  • 255skin of body
  • 231liver
  • 196limb
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 589AMP
  • 155KPMP
  • 127ENCODE
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 548hg19
  • 235GRCh38
Encyclopedia version
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

900 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
chromatin state
candidate regulatory elements
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell916722123
hepatocyte138311124
epithelial cell of proximal tubule16111111
glomerular endothelial cell1421111
pancreatic ductal cell3633112
tissue
pigmented layer of retina20
breast epithelium1322
esophagus squamous epithelium1222
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188131
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
foreskin keratinocyte111
hepatocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
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