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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 49ChIP-seq
Assay category
  • 49DNA binding
Target of assay
  • 93histone
  • 93histone modification
  • 49narrow histone mark
  • 44broad histone mark
  • 30control
  • 9transcription factor
  • 8RNA binding protein
  • 3nucleotide modification
  • 1chromatin remodeller
Date released
  • 11September, 2018
  • 9October, 2019
  • 8August, 2017
  • 7December, 2017
  • 4November, 2019
  • 2August, 2021
  • 2June, 2019
  • 2May, 2021
  • 2November, 2017
  • 1March, 2020
  • 1May, 2019
Available data
  • 49bam
  • 48bed narrowPeak
  • 48bigWig
  • 28fastq
  • 15bigBed narrowPeak
  • 3tagAlign
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 49Homo sapiens
Biosample type
  • 35primary cell
  • 8in vitro differentiated cells
  • 6cell line
Organ
  • 117brain
  • 73pancreas
  • 60liver
  • 49epithelium
  • 40heart
  • 33connective tissue
  • 26vasculature
  • 25blood vessel
  • 15kidney
  • 15limb
  • 13musculature of body
  • 12adipose tissue
  • 8embryo
  • 8nerve
  • 6artery
  • 6vein
  • 4gonad
  • 4ovary
  • 3eye
  • 2spleen
  • 1blood
  • 1bodily fluid
  • 1lymph node
  • 1pituitary gland
Project
  • 47AMP
  • 2T1D
Genome assembly (visualization)
  • 48GRCh38
  • 48hg19
Lab
  • 49AMP-T2D consortium
Audit category:
  • 10inconsistent ontology term
Audit category:
  • 11missing controlled_by
Audit category:
  • 5inconsistent control read length
BIOSAMPLE
ASSAY

49 results

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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell7
endothelial cell of umbilical vein6
epithelial cell of proximal tubule4
pancreatic acinar cell4
pancreatic alpha cell4
in vitro differentiated cells
hepatocyte5
Hepatic endoderm2
pancreatic PP cell1
cell line
EndoC_BH16
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