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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
30
candidate regulatory elements
24
target gene predictions
19
chromatin state
13
accessible chromatin
11
eQTL
10
histone modifications
6
binding sites
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
52
September, 2022
25
February, 2021
7
August, 2021
7
March, 2020
5
June, 2020
5
November, 2021
4
January, 2022
3
August, 2017
2
February, 2020
2
January, 2020
2
May, 2021
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
86
bed bed3+
16
bed bed9
9
tsv
7
bigWig
1
bam
1
bigBed bed9
Organism
123
Homo sapiens
Biosample type
81
tissue
28
cell line
14
primary cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
118
AMP
5
ENCODE
Genome assembly (visualization)
111
hg19
38
GRCh38
2
hg18
organ_slims!
epithelium
ovary
BIOSAMPLE
TYPE
123 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
liver
13
10
9
4
7
2
1
1
1
1
esophagus muscularis mucosa
5
2
2
1
1
esophagus
4
3
2
1
right lobe of liver
2
1
1
1
1
3
esophagus - muscularis
1
+ See 1 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
3
1
1
1
smooth muscle cell of the esophagus
2
2
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