Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 17candidate regulatory elements
  • 10target gene predictions
  • 7chromatin state
  • 3eQTL
  • 2gene expression
  • 2variant allelic effects
Date released
  • 21September, 2022
  • 10February, 2021
  • 3January, 2022
  • 2February, 2024
  • 2March, 2024
  • 2November, 2021
  • 1March, 2020
Available data
  • 32bed bed3+
  • 7bed bed9
  • 2tsv
Organism
  • 41Homo sapiens
Collection Tags
  • 21EpiMap
  • 10ENCODE
  • 3DGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2AMP
  • 2GTEx
  • 2T2DKP
Biosample type
  • 33tissue
  • 8primary cell
Organ
  • 2856vasculature
  • 2805blood vessel
  • 2795bodily fluid
  • 2786blood
  • 2654vein
  • 688epithelium
  • 594kidney
  • 369brain
  • 350connective tissue
  • 340musculature of body
  • 290lung
  • 255intestine
  • 220heart
  • 220limb
  • 204pancreas
  • 180embryo
  • 164skin of body
  • 154large intestine
  • 130extraembryonic component
  • 114liver
  • 110stomach
  • 89adipose tissue
  • 81small intestine
  • 75uterus
  • 66adrenal gland
  • 66mammary gland
  • 64placenta
  • 61bone element
  • 60ureter
  • 58artery
  • 58prostate gland
  • 51penis
  • 45thymus
  • 42eye
  • 42gonad
  • 41esophagus
  • 40lymph node
  • 40spinal cord
  • 31spleen
  • 22nerve
  • 21lymphoid tissue
  • 21ovary
  • 21testis
  • 21thyroid gland
  • 18lymphatic vessel
  • 18mouth
  • 12breast
  • 12pituitary gland
  • 11bronchus
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 7bone marrow
  • 3nose
  • 1pericardium
Project
  • 39AMP
  • 2ENCODE
Genome assembly (visualization)
  • 36hg19
  • 12GRCh38
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

41 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
variant allelic effects
tissue
esophagus4321
esophagus muscularis mucosa5221
esophagus squamous epithelium622
esophagus - mucosa1
esophagus - muscularis1
primary cell
epithelial cell of esophagus2112
smooth muscle cell of the esophagus2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego