Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
92
target gene predictions
78
accessible chromatin
60
chromatin state
50
gene expression
33
differential activity
19
eQTL
12
binding sites
12
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
173
September, 2022
82
February, 2021
47
March, 2023
37
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
13
June, 2020
10
March, 2020
8
August, 2021
8
January, 2022
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
3
November, 2019
2
February, 2020
2
March, 2024
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
316
bed bed3+
78
tsv
61
bigWig
56
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
483
Homo sapiens
Biosample type
264
tissue
167
primary cell
44
cell line
8
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
440
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
386
hg19
112
GRCh38
BIOSAMPLE
TYPE
483 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
1
2
islet of Langerhans
1
6
3
11
13
2
1
1
2
2
2
spleen
15
8
2
6
1
1
1
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 14 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 23 more…
cell line
EndoC_BH1
1
8
8
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
Download