Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 33chromatin state
  • 26candidate regulatory elements
  • 9accessible chromatin
  • 5histone modifications
  • 3binding sites
  • 3target gene predictions
  • 1eQTL
Date released
  • 33February, 2021
  • 33September, 2022
  • 6June, 2020
  • 3May, 2021
  • 3November, 2021
  • 1January, 2022
  • 1October, 2022
Available data
  • 47bed bed3+
  • 33bed bed9
  • 3bigWig
Organism
  • 80Homo sapiens
Collection Tags
  • 33EpiMap
  • 27ENCODE
  • 13ChIP-Atlas
  • 3AMP
  • 3DGA
  • 3T2DKP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 52tissue
  • 24primary cell
  • 3in vitro differentiated cells
  • 1cell line
Organ
  • 2830vasculature
  • 2807bodily fluid
  • 2801blood
  • 2786blood vessel
  • 2653vein
  • 591epithelium
  • 345connective tissue
  • 328brain
  • 300kidney
  • 233musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 116liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 70adipose tissue
  • 59artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 77AMP
  • 3ENCODE
Genome assembly (visualization)
  • 79hg19
  • 37GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

80 results

search-icontable-tab-icon
Clear Filters
chromatin state
candidate regulatory elements
accessible chromatin
histone modifications
binding sites
target gene predictions
eQTL
tissue
placenta141212111
chorionic villus44
chorion membrane31
umbilical cord1111
amnion11
primary cell
trophoblast cell43111
fibroblast of villous mesenchyme11112
amnion mesenchymal stem cell1
amniotic epithelial cell1
amniotic stem cell1
in vitro differentiated cells
trophoblast cell111
cell line
HTR-8/Svneo1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego