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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
127
candidate regulatory elements
94
accessible chromatin
82
target gene predictions
81
chromatin state
26
gene expression
19
binding sites
13
variant allelic effects
12
Fine-mapped variants
12
eQTL
12
histone modifications
2
caQTL
Date released
189
September, 2022
93
February, 2021
27
February, 2023
22
November, 2022
20
March, 2020
18
June, 2020
17
January, 2020
16
November, 2021
15
May, 2020
14
February, 2020
8
August, 2021
7
January, 2022
7
May, 2021
6
April, 2019
6
February, 2024
5
October, 2022
3
March, 2024
3
November, 2019
2
October, 2019
1
August, 2017
1
May, 2019
Available data
354
bed bed3+
75
bed bed9
60
bigWig
39
tsv
12
bigBed bed9
Organism
480
Homo sapiens
Biosample type
360
tissue
82
primary cell
31
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
464
AMP
16
ENCODE
Genome assembly (visualization)
443
hg19
140
GRCh38
BIOSAMPLE
TYPE
480 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
variant allelic effects
Fine-mapped variants
eQTL
histone modifications
caQTL
tissue
heart
37
5
20
21
3
1
2
1
retina
6
23
3
3
1
1
1
1
1
heart left ventricle
11
3
7
8
1
2
1
1
spinal cord
14
1
8
7
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 18 more…
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
fibroblast of cardiac tissue
3
2
4
3
retinal pigment epithelial cell
2
3
1
1
2
1
iris pigment epithelial cell
2
1
1
1
astrocyte of the spinal cord
2
1
1
+ See 16 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
NT2-D1 cell
1
1
1
1
2
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
spinal cord
1
2
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
cardiac fibroblast
1
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