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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
203
gene expression
146
candidate regulatory elements
105
accessible chromatin
73
chromatin state
71
target gene predictions
56
differential activity
15
variant allelic effects
13
binding sites
10
histone modifications
5
eQTL
Date released
213
September, 2022
187
February, 2021
140
September, 2023
28
August, 2021
24
February, 2023
22
November, 2022
20
June, 2020
18
May, 2020
13
January, 2020
11
February, 2020
7
November, 2021
4
October, 2022
3
March, 2020
2
February, 2024
2
March, 2024
1
April, 2019
1
January, 2022
1
May, 2019
Available data
356
bed bed3+
253
tsv
87
txt
73
bed bed9
69
bigWig
2
bigBed bed9
Organism
697
Homo sapiens
Biosample type
332
primary cell
307
tissue
51
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
550
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
430
hg19
105
GRCh38
organ_slims!
gonad
limb
ureter
BIOSAMPLE
TYPE
697 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
glomerular visceral epithelial cell
5
2
2
1
1
kidney tubule cell
1
3
2
2
2
retinal pigment epithelial cell
2
3
1
1
2
1
+ See 69 more…
tissue
kidney
7
29
10
16
14
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
retina
1
6
23
3
3
1
1
1
1
left kidney
18
9
9
+ See 16 more…
cell line
HEK293
3
1
1
1
2
1
WERI-Rb-1
2
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
renal cell carcinoma
1
See all biosamples
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