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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
275
candidate regulatory elements
209
gene expression
138
chromatin state
135
target gene predictions
130
accessible chromatin
56
differential activity
26
variant allelic effects
15
binding sites
12
histone modifications
10
eQTL
9
Fine-mapped variants
Date released
396
September, 2022
265
February, 2021
140
September, 2023
31
May, 2020
28
August, 2021
28
June, 2020
24
February, 2023
23
January, 2020
22
November, 2022
17
February, 2020
12
March, 2020
7
November, 2021
4
March, 2024
4
October, 2022
3
January, 2022
3
May, 2019
3
May, 2021
2
February, 2024
2
November, 2019
1
April, 2019
Available data
589
bed bed3+
271
tsv
138
bed bed9
87
txt
86
bigWig
6
bigBed bed9
Organism
1015
Homo sapiens
Biosample type
617
tissue
333
primary cell
58
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
868
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
740
hg19
201
GRCh38
BIOSAMPLE
TYPE
1015 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
target gene predictions
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
tissue
kidney
29
7
16
14
10
1
1
2
1
muscle of arm
33
16
16
1
1
muscle of leg
27
15
14
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 44 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
retinal pigment epithelial cell
2
1
1
3
2
1
+ See 70 more…
cell line
HEK293
3
1
1
1
2
1
WERI-Rb-1
2
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
renal cell carcinoma
1
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