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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
accessible chromatin
54
candidate regulatory elements
39
target gene predictions
32
chromatin state
27
gene expression
19
binding sites
18
histone modifications
10
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
91
September, 2022
48
February, 2021
31
February, 2024
24
February, 2023
22
November, 2022
13
June, 2020
11
March, 2020
11
November, 2021
10
August, 2021
5
January, 2020
5
May, 2020
4
February, 2020
4
March, 2023
4
May, 2021
3
August, 2017
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
2
May, 2024
1
July, 2020
1
November, 2019
1
September, 2018
Available data
225
bed bed3+
60
bigWig
32
tsv
29
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
300
Homo sapiens
Biosample type
158
tissue
91
primary cell
38
cell line
13
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
289
AMP
11
ENCODE
Genome assembly (visualization)
263
hg19
87
GRCh38
2
hg18
BIOSAMPLE
TYPE
300 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
4
13
10
9
1
1
2
7
1
1
retina
23
6
3
3
1
1
1
1
1
pigmented layer of retina
20
thyroid gland
1
8
5
4
1
eye
1
4
2
2
+ See 6 more…
primary cell
hepatocyte
8
2
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
2
1
1
1
1
1
retinal pigment epithelial cell
3
2
1
1
2
1
iris pigment epithelial cell
1
2
1
1
+ See 7 more…
cell line
HepG2
2
2
3
2
3
5
WERI-Rb-1
1
2
1
1
2
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 2 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
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