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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 28ATAC-seq
  • 18total RNA-seq
  • 5ChIP-seq
  • 4pCHi-C
  • 2DNase-seq
  • 1RRBS
Assay category
  • 30DNA accessibility
  • 18Transcription
  • 5DNA binding
  • 1DNA methylation
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
  • 1RNA binding protein
  • 1control
  • 1transcription factor
Date released
  • 31February, 2023
  • 21October, 2019
  • 5June, 2019
  • 1July, 2019
Available data
  • 31bed narrowPeak
  • 5bam
  • 4bigBed narrowPeak
  • 4bigWig
  • 4tsv
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 58Homo sapiens
Biosample type
  • 53tissue
  • 5primary cell
Organ
  • 808pancreas
  • 775liver
  • 627connective tissue
  • 474adipose tissue
  • 443epithelium
  • 368heart
  • 335kidney
  • 229vasculature
  • 223blood vessel
  • 215brain
  • 151bone element
  • 137artery
  • 119limb
  • 87musculature of body
  • 67blood
  • 67bodily fluid
  • 58eye
  • 42nerve
  • 35embryo
  • 24spleen
  • 21vein
  • 19lung
  • 18ureter
  • 8skeleton
  • 4gonad
  • 4ovary
  • 1bone marrow
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1thymus
Project
  • 58AMP
Genome assembly (visualization)
  • 32hg19
  • 4GRCh38
Lab
  • 58AMP-T2D consortium
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

58 results

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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
DNase-seq
RRBS
tissue
islet of Langerhans11424
retina1521
pigmented layer of retina122
primary cell
retinal pigment epithelial cell311
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