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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 3DNase-seq
  • 2ChIP-seq
  • 1RRBS
  • 1total RNA-seq
Assay category
  • 3DNA accessibility
  • 2DNA binding
  • 1DNA methylation
  • 1Transcription
Target of assay
  • 1RNA binding protein
  • 1histone
  • 1histone modification
  • 1narrow histone mark
  • 1transcription factor
Date released
  • 5June, 2019
  • 1February, 2020
  • 1July, 2019
Available data
  • 5bam
  • 5bed narrowPeak
  • 5bigBed narrowPeak
  • 5bigWig
  • 3bed bed3+
  • 3bed broadPeak
  • 3bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tsv
Organism
  • 7Homo sapiens
Biosample type
  • 4primary cell
  • 3tissue
Organ
  • 426liver
  • 201pancreas
  • 169epithelium
  • 96brain
  • 68connective tissue
  • 58blood
  • 58bodily fluid
  • 58kidney
  • 49vasculature
  • 44blood vessel
  • 41heart
  • 22musculature of body
  • 19vein
  • 17adipose tissue
  • 13embryo
  • 11artery
  • 9bone element
  • 8limb
  • 8skeleton
  • 7eye
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 7AMP
Genome assembly (visualization)
  • 6hg19
  • 5GRCh38
Lab
  • 7AMP-T2D consortium
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

7 results

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Clear Filters
DNase-seq
ChIP-seq
RRBS
total RNA-seq
primary cell
retinal pigment epithelial cell121
tissue
retina21
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