Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 59accessible chromatin
  • 9candidate regulatory elements
  • 9chromatin state
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
Date released
  • 24February, 2023
  • 22November, 2022
  • 17February, 2021
  • 9September, 2022
  • 6June, 2020
  • 4November, 2021
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • 1February, 2020
  • 1February, 2024
Available data
  • 81bed bed3+
  • 36bigWig
  • 9bed bed9
  • 1tsv
Organism
  • 90Homo sapiens
Collection Tags
  • 47CMDGA
  • 14ChIP-Atlas
  • 11ENCODE
  • 9EpiMap
  • 4AMP
  • 4T2DKP
  • 2DGA
Biosample type
  • 59tissue
  • 17primary cell
  • 8cell line
  • 6in vitro differentiated cells
Organ
  • 2830vasculature
  • 2807bodily fluid
  • 2801blood
  • 2786blood vessel
  • 2653vein
  • 591epithelium
  • 345connective tissue
  • 328brain
  • 300kidney
  • 233musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 116liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 70adipose tissue
  • 59artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 86AMP
  • 4ENCODE
Genome assembly (visualization)
  • 89hg19
  • 16GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

90 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
tissue
retina23331111
pigmented layer of retina20
eye122
corneal epithelium1
primary cell
retinal pigment epithelial cell31121
iris pigment epithelial cell111
Muller cell2
fibroblast of the conjunctiva11
retinal pigment epithelial cell1
cell line
WERI-Rb-111121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego