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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
accessible chromatin
76
target gene predictions
74
gene expression
66
candidate regulatory elements
42
chromatin state
37
differential activity
26
eQTL
21
binding sites
21
histone modifications
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
114
September, 2022
69
February, 2021
54
February, 2024
51
March, 2023
37
May, 2021
25
November, 2021
20
January, 2021
20
March, 2020
18
August, 2021
13
June, 2020
9
May, 2020
8
January, 2022
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
4
February, 2020
3
November, 2019
2
March, 2024
2
May, 2022
2
May, 2024
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
September, 2018
Available data
299
bed bed3+
106
tsv
81
bigWig
35
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
485
Homo sapiens
Biosample type
211
tissue
195
primary cell
69
cell line
10
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
438
AMP
25
ENCODE
20
T1D
2
community
Genome assembly (visualization)
357
hg19
136
GRCh38
2
hg18
organ_slims!
lung
BIOSAMPLE
TYPE
485 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
liver
4
10
1
13
9
1
7
1
2
1
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
ovary
1
6
1
8
4
1
+ See 10 more…
primary cell
hepatocyte
8
3
13
2
1
1
4
2
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 20 more…
cell line
EndoC_BH1
8
1
8
3
1
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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