Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
target gene predictions
38
candidate regulatory elements
19
chromatin state
11
accessible chromatin
7
binding sites
6
gene expression
4
eQTL
4
histone modifications
Date released
57
September, 2022
52
February, 2024
28
February, 2021
9
June, 2020
6
March, 2024
4
January, 2022
4
November, 2021
3
May, 2021
2
March, 2020
2
October, 2022
Available data
138
bed bed3+
19
bed bed9
6
tsv
2
bigWig
Organism
167
Homo sapiens
Biosample type
80
tissue
78
cell line
9
primary cell
Organ
976
epithelium
652
kidney
481
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
274
vasculature
260
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
162
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
29
lymphatic vessel
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
163
AMP
4
ENCODE
Genome assembly (visualization)
157
hg19
79
GRCh38
organ_slims!
skin of body
BIOSAMPLE
TYPE
167 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
histone modifications
tissue
ovary
6
8
4
1
1
1
testis
3
7
3
1
1
1
1
1
Peyer's patch
3
7
3
1
uterus
2
3
1
1
1
1
urinary bladder
2
3
2
1
+ See 7 more…
cell line
HeLa-S3
55
5
3
1
GM18507
2
1
1
1
1
NT2-D1 cell
1
1
1
1
2
Ishikawa
1
NT2/D1
1
primary cell
Ishikawa
1
1
1
luteal cell
1
1
uterine smooth muscle cell
1
1
Leydig cell
1
somatic gonadal cell
1
See all biosamples
Download