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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12total RNA-seq
  • 7DNase-seq
  • 3pCHi-C
  • 1Hi-C
  • 1single cell RNA-seq
  • 1small RNA-seq
Assay category
  • 14Transcription
  • 7DNA accessibility
  • 13D chromatin structure
Date released
  • 7June, 2019
  • 6July, 2019
  • 3February, 2020
  • 3March, 2020
  • 3May, 2021
  • 2October, 2019
  • 1February, 2023
Available data
  • 17bam
  • 17bigWig
  • 16tsv
  • 7bed bed3+
  • 7bed broadPeak
  • 7bed narrowPeak
  • 7bigBed broadPeak
  • 7bigBed narrowPeak
  • 1bedpe bed3+
  • 1hic
Organism
  • 25Homo sapiens
Biosample type
  • 19tissue
  • 5primary cell
  • 1in vitro differentiated cells
Organ
  • 138pancreas
  • 81epithelium
  • 71brain
  • 57connective tissue
  • 25heart
  • 19kidney
  • 17adipose tissue
  • 16liver
  • 9musculature of body
  • 8bone element
  • 8skeleton
  • 7blood vessel
  • 7vasculature
  • 4artery
  • 3eye
  • 3limb
  • 2blood
  • 2bodily fluid
  • 2embryo
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1nerve
  • 1ovary
  • 1pericardium
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 25AMP
Genome assembly (visualization)
  • 17GRCh38
  • 15hg19
Lab
  • 25AMP-T2D consortium
BIOSAMPLE
ASSAY

25 results

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Clear Filters
total RNA-seq
DNase-seq
pCHi-C
Hi-C
single cell RNA-seq
small RNA-seq
tissue
heart24111
heart left ventricle11
heart right ventricle11
cardiac atrium1
cardiac ventricle1
primary cell
cardiac atrium fibroblast1
cardiac fibroblast1
cardiac ventricle fibroblast1
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
in vitro differentiated cells
cardiac fibroblast1
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