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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 11ChIP-seq
  • 2DNase-seq
  • 2RRBS
  • 1total RNA-seq
Assay category
  • 11DNA binding
  • 2DNA accessibility
  • 2DNA methylation
  • 1Transcription
Target of assay
  • 8histone
  • 8histone modification
  • 4broad histone mark
  • 4narrow histone mark
  • 2transcription factor
  • 1control
Date released
  • 6October, 2019
  • 3June, 2019
  • 2February, 2021
  • 2July, 2019
  • 2May, 2019
  • 1April, 2019
Available data
  • 14bam
  • 13bigWig
  • 12bed narrowPeak
  • 5bigBed narrowPeak
  • 2bed bed3+
  • 2bed bedMethyl
  • 2bed broadPeak
  • 2bigBed bedMethyl
  • 2bigBed broadPeak
  • 2tagAlign
  • 1tsv
Organism
  • 16Homo sapiens
Biosample type
  • 10tissue
  • 4primary cell
  • 2cell line
Organ
  • 410liver
  • 88epithelium
  • 63pancreas
  • 56blood
  • 56bodily fluid
  • 42vasculature
  • 39kidney
  • 37blood vessel
  • 25brain
  • 18vein
  • 16heart
  • 13musculature of body
  • 11connective tissue
  • 11embryo
  • 7artery
  • 5limb
  • 4eye
  • 1bone element
  • 1bone marrow
  • 1mammary gland
  • 1pericardium
  • 1thymus
Project
  • 16AMP
Genome assembly (visualization)
  • 15hg19
  • 13GRCh38
Lab
  • 16AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
BIOSAMPLE
ASSAY

16 results

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Clear Filters
ChIP-seq
DNase-seq
RRBS
total RNA-seq
tissue
heart51
heart left ventricle11
coronary artery1
right atrium auricular region1
primary cell
cardiac fibroblast121
cell line
smooth muscle cell of the coronary artery2
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