Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 135target gene predictions
  • 112candidate regulatory elements
  • 58chromatin state
  • 12accessible chromatin
  • 6binding sites
  • 6histone modifications
  • 3eQTL
  • 3gene expression
Date released
  • 161September, 2022
  • 69February, 2021
  • 69July, 2026
  • 10June, 2020
  • 6May, 2021
  • 4August, 2017
  • 4November, 2021
  • 3February, 2024
  • 3January, 2022
  • 3March, 2024
  • 2March, 2020
  • 1October, 2022
Available data
  • 278bed bed3+
  • 54bed bed9
  • 3tsv
  • 2bigWig
Organism
  • 335Homo sapiens
Collection Tags
  • 162EpiMap
  • 69ENCODE-rE2G
  • 59ENCODE
  • 21ChIP-Atlas
  • 8DGA
  • 4AMP
  • 4T2DKP
  • 3GTEx
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 24DN
Biosample type
  • 276tissue
  • 55cell line
  • 4primary cell
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • epithelium
  • 903brain
  • 756kidney
  • 518connective tissue
  • 488heart
  • 440lung
  • 386musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 331AMP
  • 4ENCODE
Genome assembly (visualization)
  • 260hg19
  • 132GRCh38
organ_slims!
  • epithelium
BIOSAMPLE
TYPE

335 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
small intestine30291511
large intestine28271311
sigmoid colon101051
transverse colon98411
Peyer's patch7731
cell line
HCT1161921
HT-29321111
SW480221111
RKO11111
Caco-231
primary cell
enteric smooth muscle cell22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego