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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
296
candidate regulatory elements
253
gene expression
192
target gene predictions
153
chromatin state
136
accessible chromatin
89
differential activity
30
variant allelic effects
22
eQTL
20
histone modifications
18
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
433
September, 2022
290
February, 2021
140
September, 2023
47
March, 2023
40
November, 2021
39
May, 2021
36
August, 2021
32
February, 2024
29
June, 2020
25
May, 2020
20
January, 2021
18
January, 2020
14
March, 2020
11
February, 2020
8
January, 2022
7
August, 2017
7
August, 2018
6
October, 2019
5
March, 2024
3
October, 2022
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
696
bed bed3+
330
tsv
145
bed bed9
104
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1218
Homo sapiens
Biosample type
647
tissue
458
primary cell
109
cell line
4
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1016
AMP
140
KPMP
40
ENCODE
20
T1D
2
community
Genome assembly (visualization)
856
hg19
245
GRCh38
organ_slims!
lymph node
BIOSAMPLE
TYPE
1218 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
eQTL
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
kidney
29
7
14
16
10
1
1
2
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
islet of Langerhans
11
1
3
6
1
13
1
2
2
2
2
right kidney
20
10
10
1
1
+ See 46 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
pancreatic ductal cell
3
3
6
3
1
2
1
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 87 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
1
2
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 21 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
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