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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
candidate regulatory elements
83
target gene predictions
73
chromatin state
22
accessible chromatin
16
histone modifications
12
binding sites
11
eQTL
6
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
201
September, 2022
89
February, 2021
14
June, 2020
8
March, 2020
8
May, 2021
7
August, 2017
7
August, 2021
5
November, 2021
4
February, 2024
4
January, 2022
3
March, 2024
2
February, 2020
2
January, 2020
2
May, 2022
2
October, 2022
1
May, 2020
1
May, 2024
1
November, 2019
1
September, 2018
Available data
273
bed bed3+
66
bed bed9
11
tsv
7
bigWig
1
bam
1
bigBed bed9
Organism
362
Homo sapiens
Biosample type
289
tissue
59
cell line
14
primary cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
357
AMP
5
ENCODE
Genome assembly (visualization)
348
hg19
90
GRCh38
2
hg18
organ_slims!
epithelium
nose
BIOSAMPLE
TYPE
362 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
2
1
7
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 16 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 6 more…
primary cell
hepatic stellate cell
2
1
1
3
1
1
1
enteric smooth muscle cell
2
2
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