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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
192
candidate regulatory elements
127
target gene predictions
102
chromatin state
54
accessible chromatin
30
gene expression
23
histone modifications
19
binding sites
12
eQTL
9
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
285
September, 2022
127
February, 2021
37
February, 2024
33
November, 2021
19
June, 2020
14
March, 2020
11
May, 2021
10
August, 2021
8
August, 2017
6
March, 2024
5
January, 2022
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
2
May, 2024
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
431
bed bed3+
94
bed bed9
39
bigWig
34
tsv
3
csv
1
bam
1
bigBed bed9
Organism
576
Homo sapiens
Biosample type
408
tissue
99
primary cell
62
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
543
AMP
33
ENCODE
Genome assembly (visualization)
534
hg19
176
GRCh38
2
hg18
BIOSAMPLE
TYPE
576 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
stomach
40
21
19
3
1
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
1
2
1
7
1
1
sigmoid colon
10
7
5
1
+ See 26 more…
primary cell
hepatocyte
2
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
1
3
1
1
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 12 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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