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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
candidate regulatory elements
147
target gene predictions
100
chromatin state
94
accessible chromatin
53
gene expression
33
differential activity
19
eQTL
16
variant allelic effects
15
histone modifications
11
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
277
September, 2022
131
February, 2021
47
March, 2023
46
November, 2021
41
May, 2021
33
February, 2024
20
January, 2021
17
June, 2020
12
March, 2020
8
August, 2017
8
August, 2021
8
January, 2022
7
August, 2018
6
May, 2020
6
October, 2019
5
March, 2024
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
480
bed bed3+
91
bed bed9
81
tsv
73
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
685
Homo sapiens
Biosample type
454
tissue
160
primary cell
68
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
617
AMP
46
ENCODE
20
T1D
2
community
Genome assembly (visualization)
585
hg19
173
GRCh38
organ_slims!
ovary
BIOSAMPLE
TYPE
685 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
stomach
40
21
19
3
1
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
islet of Langerhans
1
3
6
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 32 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 24 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
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