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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 73target gene predictions
  • 59chromatin state
  • 55candidate regulatory elements
  • 21accessible chromatin
  • 8histone modifications
  • 6binding sites
  • 3eQTL
  • 3gene expression
  • 3variant allelic effects
Date released
  • 164September, 2022
  • 19November, 2021
  • 13February, 2021
  • 10June, 2020
  • 6February, 2024
  • 6May, 2021
  • 4August, 2017
  • 3January, 2022
  • 3March, 2024
  • 2March, 2020
  • 1October, 2022
Available data
  • 173bed bed3+
  • 55bed bed9
  • 11bigWig
  • 3tsv
Organism
  • 231Homo sapiens
Collection Tags
  • 165EpiMap
  • 23ChIP-Atlas
  • 19AMP
  • 19T2DKP
  • 11DGA
  • 3GTEx
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 24DN
  • 1ENCODE
Biosample type
  • 180tissue
  • 28cell line
  • 23primary cell
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 212AMP
  • 19ENCODE
Genome assembly (visualization)
  • 225hg19
  • 79GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

231 results

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Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine17151511
large intestine14131311
sigmoid colon7551
transverse colon54411
Peyer's patch3331
cell line
HT-29211111
SW480111111
HCT116311
HCT-116 cell112
RKO111
primary cell
colon epithelial cell33
enterocyte33
enteric smooth muscle cell22
enterocyte of epithelium of small intestine11
paneth cell11
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