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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
313
candidate regulatory elements
227
gene expression
174
target gene predictions
165
chromatin state
89
accessible chromatin
60
differential activity
29
binding sites
24
histone modifications
21
variant allelic effects
13
eQTL
3
Fine-mapped variants
1
caQTL
Date released
481
September, 2022
284
February, 2021
140
September, 2023
38
August, 2021
31
February, 2024
26
June, 2020
22
May, 2020
17
January, 2020
17
November, 2021
14
March, 2020
11
February, 2020
7
May, 2021
7
October, 2022
4
August, 2017
4
March, 2023
3
April, 2020
3
January, 2022
3
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
649
bed bed3+
280
tsv
161
bed bed9
87
txt
68
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
1119
Homo sapiens
Biosample type
540
tissue
406
primary cell
165
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
959
AMP
140
KPMP
17
ENCODE
3
LungMap
Genome assembly (visualization)
820
hg19
245
GRCh38
2
hg18
organ_slims!
pancreas
BIOSAMPLE
TYPE
1119 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
2
1
1
lung
33
1
17
16
1
left lung
26
13
13
liver
13
1
10
9
4
1
1
2
7
1
right lung
22
11
11
1
+ See 21 more…
primary cell
hepatocyte
1
13
3
1
8
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
fibroblast of lung
6
4
4
2
+ See 74 more…
cell line
A549
21
19
18
1
2
1
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 19 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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