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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
212
candidate regulatory elements
205
gene expression
109
target gene predictions
105
chromatin state
61
accessible chromatin
56
differential activity
21
binding sites
17
variant allelic effects
12
histone modifications
6
eQTL
3
Fine-mapped variants
Date released
306
September, 2022
230
February, 2021
140
September, 2023
28
August, 2021
23
June, 2020
19
May, 2020
15
January, 2020
11
February, 2020
9
November, 2021
6
March, 2020
6
October, 2022
3
February, 2024
3
March, 2024
3
May, 2021
2
January, 2022
1
April, 2019
1
August, 2017
1
May, 2019
Available data
429
bed bed3+
257
tsv
104
bed bed9
87
txt
39
bigWig
2
bigBed bed9
Organism
807
Homo sapiens
Biosample type
360
primary cell
357
tissue
86
cell line
4
in vitro differentiated cells
Organ
976
epithelium
652
kidney
481
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
274
vasculature
260
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
162
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
29
lymphatic vessel
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
658
AMP
140
KPMP
9
ENCODE
Genome assembly (visualization)
538
hg19
144
GRCh38
BIOSAMPLE
TYPE
807 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
mammary gland epithelial cell
3
4
3
1
1
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
+ See 70 more…
tissue
kidney
29
7
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 21 more…
cell line
MCF-7
9
6
5
1
3
2
HEK293
3
1
1
1
2
1
T47D
3
2
2
GM18507
1
2
1
1
1
ACHN
2
1
1
1
+ See 12 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
renal cell carcinoma
1
See all biosamples
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