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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
206
gene expression
202
candidate regulatory elements
147
target gene predictions
95
chromatin state
59
accessible chromatin
56
differential activity
18
binding sites
18
variant allelic effects
13
histone modifications
7
eQTL
3
Fine-mapped variants
Date released
276
September, 2022
229
February, 2021
140
September, 2023
52
February, 2024
28
August, 2021
22
May, 2020
21
June, 2020
15
January, 2020
12
February, 2020
6
March, 2020
5
November, 2021
5
October, 2022
4
March, 2024
3
January, 2022
3
May, 2021
1
April, 2019
1
May, 2019
1
November, 2019
Available data
453
bed bed3+
259
tsv
95
bed bed9
87
txt
39
bigWig
3
bigBed bed9
Organism
824
Homo sapiens
Biosample type
355
primary cell
341
tissue
121
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
679
AMP
140
KPMP
5
ENCODE
Genome assembly (visualization)
553
hg19
184
GRCh38
BIOSAMPLE
TYPE
824 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
1
4
2
glomerular visceral epithelial cell
5
2
1
1
2
+ See 68 more…
tissue
kidney
7
29
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 21 more…
cell line
HeLa-S3
5
55
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 13 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
renal cell carcinoma
1
See all biosamples
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