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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
119
target gene predictions
115
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
12
binding sites
12
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
219
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
21
November, 2021
20
January, 2021
19
June, 2020
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
2
October, 2022
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
468
bed bed3+
327
tsv
93
bigWig
90
bed bed9
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
929
Homo sapiens
Biosample type
435
primary cell
415
tissue
75
cell line
4
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
746
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
573
hg19
166
GRCh38
organ_slims!
lymph node
skeleton
BIOSAMPLE
TYPE
929 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
1
2
islet of Langerhans
11
1
6
3
1
13
2
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 26 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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