Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7DNase-seq
  • 7total RNA-seq
  • 2snDrop-seq
  • 1ChIP-seq
  • 1FAIRE-seq
  • 1small RNA-seq
Assay category
  • 8DNA accessibility
  • 8Transcription
  • 1DNA binding
Target of assay
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 7July, 2019
  • 5June, 2019
  • 4October, 2019
  • 2February, 2021
  • 1April, 2019
Available data
  • 15bam
  • 14bigWig
  • 10tsv
  • 6bed narrowPeak
  • 6bigBed narrowPeak
  • 5bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 19Homo sapiens
Biosample type
  • 10primary cell
  • 9tissue
Organ
  • 138pancreas
  • 81epithelium
  • 71brain
  • 57connective tissue
  • 25heart
  • 19kidney
  • 17adipose tissue
  • 16liver
  • 9musculature of body
  • 8bone element
  • 8skeleton
  • 7blood vessel
  • 7vasculature
  • 4artery
  • 3eye
  • 3limb
  • 2blood
  • 2bodily fluid
  • 2embryo
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1nerve
  • 1ovary
  • 1pericardium
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 19AMP
Genome assembly (visualization)
  • 13GRCh38
  • 11hg19
Lab
  • 19AMP-T2D consortium
BIOSAMPLE
ASSAY

19 results

search-icontable-tab-icon
Clear Filters
DNase-seq
total RNA-seq
snDrop-seq
ChIP-seq
FAIRE-seq
small RNA-seq
primary cell
kidney glomerular epithelial cell21
kidney tubule cell21
epithelial cell of proximal tubule1
glomerular endothelial cell1
kidney epithelial cell1
tissue
kidney211
metanephros11
kidney (cortex)1
kidney (medulla)1
left kidney1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego