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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
236
candidate regulatory elements
144
target gene predictions
125
chromatin state
61
accessible chromatin
37
gene expression
26
binding sites
26
histone modifications
17
eQTL
11
variant allelic effects
9
Fine-mapped variants
5
differential activity
3
caQTL
Date released
345
September, 2022
163
February, 2021
47
February, 2024
22
November, 2021
20
March, 2020
18
June, 2020
14
May, 2021
11
August, 2021
8
August, 2017
8
February, 2020
8
January, 2020
8
May, 2020
5
May, 2022
5
October, 2022
4
January, 2022
4
March, 2023
4
March, 2024
2
May, 2019
1
July, 2020
1
November, 2019
1
October, 2019
1
September, 2018
Available data
515
bed bed3+
117
bed bed9
44
tsv
42
bigWig
4
bigBed bed9
3
csv
1
bam
Organism
700
Homo sapiens
Biosample type
493
tissue
119
primary cell
79
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
678
AMP
22
ENCODE
Genome assembly (visualization)
656
hg19
198
GRCh38
2
hg18
organ_slims!
bronchus
pancreas
BIOSAMPLE
TYPE
700 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
liver
13
10
9
4
1
1
2
7
1
1
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primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
skeletal muscle satellite cell
2
2
2
5
2
hepatic stellate cell
1
1
1
3
1
1
1
skeletal muscle fiber
5
2
2
+ See 10 more…
cell line
HepG2
2
3
2
2
3
5
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 10 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
myotube
1
1
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