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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
138
candidate regulatory elements
122
target gene predictions
103
accessible chromatin
83
chromatin state
76
gene expression
37
differential activity
29
binding sites
27
eQTL
26
histone modifications
16
variant allelic effects
11
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
218
September, 2022
119
February, 2021
57
February, 2024
51
March, 2023
43
May, 2021
29
November, 2021
24
March, 2020
20
January, 2021
19
June, 2020
18
August, 2021
11
May, 2020
10
August, 2017
10
January, 2020
8
January, 2022
7
August, 2018
6
October, 2019
5
February, 2020
4
October, 2022
3
March, 2024
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
September, 2018
Available data
443
bed bed3+
112
tsv
84
bigWig
72
bed bed9
14
bigBed narrowPeak
6
csv
5
bigBed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
673
Homo sapiens
Biosample type
343
tissue
219
primary cell
101
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
622
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
542
hg19
182
GRCh38
2
hg18
BIOSAMPLE
TYPE
673 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
large intestine
27
14
1
13
1
liver
13
10
4
9
1
1
1
7
2
1
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
spinal cord
14
8
1
7
1
body of pancreas
8
5
4
2
1
1
3
+ See 23 more…
primary cell
hepatocyte
1
3
8
1
13
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
+ See 20 more…
cell line
EndoC_BH1
1
8
8
3
1
HepG2
2
3
2
2
3
5
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 15 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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